Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NKX2-3Q8TAU0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NKX2-3Q8TAU0 AL023806.1-201ENST00000603994 1649 ntBASIC20.27■□□□□ 0.83
NKX2-3Q8TAU0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.27■□□□□ 0.83
NKX2-3Q8TAU0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NKX2-3Q8TAU0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NKX2-3Q8TAU0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AC092068.3-201ENST00000587894 2016 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 KRT18P2-201ENST00000447938 1258 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 PAWRP1-201ENST00000451083 565 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AC108073.2-201ENST00000464002 357 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 ALG1L5P-201ENST00000482043 771 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 SLC25A6P2-201ENST00000497974 877 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AL096865.1-201ENST00000606796 927 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AL805961.1-202ENST00000641562 540 ntBASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NKX2-3Q8TAU0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 AC008667.4-201ENST00000607370 168 ntBASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 AC004790.2-201ENST00000623588 572 ntBASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 FRMD8P1-201ENST00000440433 1524 ntBASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
NKX2-3Q8TAU0 LINC02012-201ENST00000608206 1725 ntBASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 IGLL3P-201ENST00000412472 434 ntBASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 AC092474.2-201ENST00000424288 719 ntBASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-3Q8TAU0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms