Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SIMC1Q8NDZ2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 MYCLP1-201ENST00000372451 1075 ntBASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 AL135999.2-201ENST00000622438 1686 ntBASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SIMC1Q8NDZ2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 SPDYE21P-201ENST00000413323 827 ntBASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 AF238378.1-201ENST00000526806 358 ntBASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SIMC1Q8NDZ2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 AC116353.5-201ENST00000638148 1699 ntBASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SIMC1Q8NDZ2 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms