Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 PCDHB18P-201ENST00000524813 2368 ntBASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
BRAT1Q6PJG6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 LINC02012-201ENST00000608206 1725 ntBASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
BRAT1Q6PJG6 AC002310.6-201ENST00000624451 1377 ntBASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 IGLL3P-201ENST00000412472 434 ntBASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 PGAM5P1-201ENST00000518923 814 ntBASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 AC096734.2-201ENST00000562054 433 ntBASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 AC040169.1-201ENST00000565382 521 ntBASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
BRAT1Q6PJG6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms