Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 MIR346-201ENST00000362234 95 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 ELK2AP-201ENST00000392510 1007 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 HMGA1P7-201ENST00000406908 502 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 AC234783.1-201ENST00000441761 496 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 AC119751.2-201ENST00000504529 210 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RSPO4Q2I0M5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.52■□□□□ 0.23
RSPO4Q2I0M5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 DFFBP1-201ENST00000433250 979 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 TTTY23B-201ENST00000442790 549 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 GNAQP1-201ENST00000444815 1067 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 HLA-V-204ENST00000476601 1289 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 AC008494.3-201ENST00000606615 944 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 AC018529.1-201ENST00000613063 361 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 WASH6P-202ENST00000359512 1437 ntBASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RSPO4Q2I0M5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 ACTBP11-201ENST00000436287 1126 ntBASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 DUTP2-201ENST00000519164 463 ntBASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.5■□□□□ 0.23
RSPO4Q2I0M5 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms