Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
DDR1Q08345 AP3S2-216ENST00000617003 1561 ntBASIC21.13■□□□□ 0.97
DDR1Q08345 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.13■□□□□ 0.97
DDR1Q08345 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
DDR1Q08345 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDR1Q08345 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.13■□□□□ 0.97
DDR1Q08345 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DDR1Q08345 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DDR1Q08345 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DDR1Q08345 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.12■□□□□ 0.97
DDR1Q08345 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.12■□□□□ 0.97
DDR1Q08345 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.12■□□□□ 0.97
DDR1Q08345 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 AC008738.7-201ENST00000609744 511 ntBASIC21.12■□□□□ 0.97
DDR1Q08345 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.12■□□□□ 0.97
DDR1Q08345 AC007967.4-201ENST00000614700 386 ntBASIC21.12■□□□□ 0.97
DDR1Q08345 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 BX323043.1-201ENST00000641006 1765 ntBASIC21.12■□□□□ 0.97
DDR1Q08345 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.12■□□□□ 0.97
DDR1Q08345 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
DDR1Q08345 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDR1Q08345 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.12■□□□□ 0.97
DDR1Q08345 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.11■□□□□ 0.97
DDR1Q08345 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 AC120498.9-201ENST00000339021 3867 ntBASIC21.11■□□□□ 0.97
DDR1Q08345 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC21.11■□□□□ 0.97
DDR1Q08345 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC21.11■□□□□ 0.97
DDR1Q08345 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.11■□□□□ 0.97
DDR1Q08345 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 AC022494.1-201ENST00000466044 728 ntBASIC21.11■□□□□ 0.97
DDR1Q08345 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.11■□□□□ 0.97
DDR1Q08345 AC003101.2-201ENST00000612557 442 ntBASIC21.11■□□□□ 0.97
DDR1Q08345 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.11■□□□□ 0.97
DDR1Q08345 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.11■□□□□ 0.97
DDR1Q08345 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDR1Q08345 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDR1Q08345 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.11■□□□□ 0.97
DDR1Q08345 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
DDR1Q08345 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDR1Q08345 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.1■□□□□ 0.97
DDR1Q08345 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 AC093503.3-201ENST00000624917 2352 ntBASIC21.1■□□□□ 0.97
DDR1Q08345 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.1■□□□□ 0.97
DDR1Q08345 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.1■□□□□ 0.97
DDR1Q08345 KRT17P7-201ENST00000451704 1104 ntBASIC21.1■□□□□ 0.97
DDR1Q08345 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.1■□□□□ 0.97
DDR1Q08345 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.1■□□□□ 0.97
DDR1Q08345 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.1■□□□□ 0.97
DDR1Q08345 AC010336.2-201ENST00000564226 506 ntBASIC21.1■□□□□ 0.97
DDR1Q08345 TP53TG3HP-202ENST00000569755 579 ntBASIC21.1■□□□□ 0.97
DDR1Q08345 AC091167.2-201ENST00000579581 588 ntBASIC21.1■□□□□ 0.97
DDR1Q08345 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.1■□□□□ 0.97
DDR1Q08345 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.1■□□□□ 0.97
DDR1Q08345 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.1■□□□□ 0.97
DDR1Q08345 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
DDR1Q08345 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.1■□□□□ 0.97
DDR1Q08345 AC138028.4-201ENST00000564984 1845 ntBASIC21.1■□□□□ 0.97
DDR1Q08345 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.1■□□□□ 0.97
DDR1Q08345 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
DDR1Q08345 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.1■□□□□ 0.97
DDR1Q08345 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDR1Q08345 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms