Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.59■□□□□ 0.25
HMGCS1Q01581 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HMGCS1Q01581 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.58■□□□□ 0.25
HMGCS1Q01581 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HMGCS1Q01581 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.58■□□□□ 0.25
HMGCS1Q01581 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.25
HMGCS1Q01581 AC092171.3-201ENST00000610122 2651 ntBASIC16.58■□□□□ 0.25
HMGCS1Q01581 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 AP000867.3-201ENST00000524675 377 ntBASIC16.58■□□□□ 0.24
HMGCS1Q01581 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 AC124947.2-201ENST00000547118 1133 ntBASIC16.58■□□□□ 0.24
HMGCS1Q01581 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 AC078925.2-201ENST00000624013 1973 ntBASIC16.58■□□□□ 0.24
HMGCS1Q01581 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HMGCS1Q01581 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HMGCS1Q01581 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 AC148477.5-201ENST00000625164 1645 ntBASIC16.57■□□□□ 0.24
HMGCS1Q01581 PMPCAP1-201ENST00000508114 1576 ntBASIC16.57■□□□□ 0.24
HMGCS1Q01581 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 UPK3BP1-201ENST00000428678 509 ntBASIC16.57■□□□□ 0.24
HMGCS1Q01581 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 AC069148.1-201ENST00000608741 768 ntBASIC16.57■□□□□ 0.24
HMGCS1Q01581 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGCS1Q01581 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGCS1Q01581 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGCS1Q01581 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HMGCS1Q01581 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms