Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ASIC1P78348 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ASIC1P78348 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ASIC1P78348 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.19■□□□□ 0.66
ASIC1P78348 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ASIC1P78348 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.19■□□□□ 0.66
ASIC1P78348 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ASIC1P78348 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.19■□□□□ 0.66
ASIC1P78348 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ASIC1P78348 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
ASIC1P78348 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 AC106795.1-205ENST00000512851 1056 ntBASIC19.19■□□□□ 0.66
ASIC1P78348 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.19■□□□□ 0.66
ASIC1P78348 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
ASIC1P78348 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.19■□□□□ 0.66
ASIC1P78348 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.19■□□□□ 0.66
ASIC1P78348 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.19■□□□□ 0.66
ASIC1P78348 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.19■□□□□ 0.66
ASIC1P78348 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ASIC1P78348 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ASIC1P78348 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.18■□□□□ 0.66
ASIC1P78348 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 GPR89P-201ENST00000407924 1495 ntBASIC19.18■□□□□ 0.66
ASIC1P78348 CROCCP1-201ENST00000426910 5675 ntBASIC19.18■□□□□ 0.66
ASIC1P78348 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ASIC1P78348 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 ACTG1P4-201ENST00000425123 1122 ntBASIC19.18■□□□□ 0.66
ASIC1P78348 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
ASIC1P78348 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.18■□□□□ 0.66
ASIC1P78348 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.18■□□□□ 0.66
ASIC1P78348 AC124947.2-201ENST00000547118 1133 ntBASIC19.18■□□□□ 0.66
ASIC1P78348 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.18■□□□□ 0.66
ASIC1P78348 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.18■□□□□ 0.66
ASIC1P78348 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.18■□□□□ 0.66
ASIC1P78348 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.18■□□□□ 0.66
ASIC1P78348 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
ASIC1P78348 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ASIC1P78348 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ASIC1P78348 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ASIC1P78348 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 AC105020.1-201ENST00000435356 2205 ntBASIC19.17■□□□□ 0.66
ASIC1P78348 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.17■□□□□ 0.66
ASIC1P78348 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.17■□□□□ 0.66
ASIC1P78348 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.17■□□□□ 0.66
ASIC1P78348 TSPY19P-201ENST00000418461 509 ntBASIC19.17■□□□□ 0.66
ASIC1P78348 TSPY18P-201ENST00000441642 509 ntBASIC19.17■□□□□ 0.66
ASIC1P78348 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.17■□□□□ 0.66
ASIC1P78348 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.17■□□□□ 0.66
ASIC1P78348 AC091304.2-201ENST00000564639 760 ntBASIC19.17■□□□□ 0.66
ASIC1P78348 AC012313.10-201ENST00000623509 926 ntBASIC19.17■□□□□ 0.66
ASIC1P78348 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 AC099398.1-201ENST00000567919 2776 ntBASIC19.17■□□□□ 0.66
ASIC1P78348 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ASIC1P78348 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ASIC1P78348 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ASIC1P78348 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.16■□□□□ 0.66
ASIC1P78348 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms