Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SPCS3P61009 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SPCS3P61009 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.06□□□□□ -0.16
SPCS3P61009 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS3P61009 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS3P61009 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SPCS3P61009 DOC2GP-204ENST00000639052 2548 ntBASIC14.05□□□□□ -0.16
SPCS3P61009 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.05□□□□□ -0.16
SPCS3P61009 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.05□□□□□ -0.16
SPCS3P61009 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.05□□□□□ -0.16
SPCS3P61009 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SPCS3P61009 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 AC105020.1-201ENST00000435356 2205 ntBASIC14.05□□□□□ -0.16
SPCS3P61009 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 PCDHA14-201ENST00000506751 2298 ntBASIC14.05□□□□□ -0.16
SPCS3P61009 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
SPCS3P61009 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SPCS3P61009 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 HLA-F-220ENST00000434407 884 ntBASIC14.05□□□□□ -0.16
SPCS3P61009 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.05□□□□□ -0.16
SPCS3P61009 MTCL1P1-201ENST00000446207 792 ntBASIC14.05□□□□□ -0.16
SPCS3P61009 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SPCS3P61009 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SPCS3P61009 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SPCS3P61009 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 PCDHB19P-201ENST00000570871 2371 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 AC093525.9-201ENST00000624961 1746 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS3P61009 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SPCS3P61009 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 MYCLP1-201ENST00000372451 1075 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.04□□□□□ -0.16
SPCS3P61009 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 TSPY15P-201ENST00000457163 923 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.04□□□□□ -0.16
SPCS3P61009 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 AL138966.2-201ENST00000621997 464 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.04□□□□□ -0.16
SPCS3P61009 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 AC008741.2-201ENST00000612792 3115 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SPCS3P61009 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SPCS3P61009 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.04□□□□□ -0.16
SPCS3P61009 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.04□□□□□ -0.16
SPCS3P61009 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SPCS3P61009 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPCS3P61009 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS3P61009 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS3P61009 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.03□□□□□ -0.16
SPCS3P61009 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS3P61009 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPCS3P61009 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
SPCS3P61009 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.03□□□□□ -0.16
SPCS3P61009 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms