Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PAX9P55771 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
PAX9P55771 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PAX9P55771 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PAX9P55771 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.83□□□□□ -0.2
PAX9P55771 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
PAX9P55771 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
PAX9P55771 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
PAX9P55771 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.82□□□□□ -0.2
PAX9P55771 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX9P55771 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX9P55771 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX9P55771 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 RASA4DP-201ENST00000460726 1199 ntBASIC13.82□□□□□ -0.2
PAX9P55771 ECEL1P2-202ENST00000465689 757 ntBASIC13.82□□□□□ -0.2
PAX9P55771 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.82□□□□□ -0.2
PAX9P55771 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.82□□□□□ -0.2
PAX9P55771 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.82□□□□□ -0.2
PAX9P55771 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.82□□□□□ -0.2
PAX9P55771 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.82□□□□□ -0.2
PAX9P55771 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX9P55771 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
PAX9P55771 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.82□□□□□ -0.2
PAX9P55771 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 MST1L-201ENST00000442552 2185 ntBASIC13.82□□□□□ -0.2
PAX9P55771 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
PAX9P55771 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.82□□□□□ -0.2
PAX9P55771 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 MTHFR-217ENST00000641820 1569 ntBASIC13.81□□□□□ -0.2
PAX9P55771 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
PAX9P55771 IGHGP-201ENST00000390555 1178 ntBASIC13.81□□□□□ -0.2
PAX9P55771 HLA-F-220ENST00000434407 884 ntBASIC13.81□□□□□ -0.2
PAX9P55771 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.81□□□□□ -0.2
PAX9P55771 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.81□□□□□ -0.2
PAX9P55771 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 AL353692.3-201ENST00000407031 1396 ntBASIC13.81□□□□□ -0.2
PAX9P55771 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
PAX9P55771 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PAX9P55771 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
PAX9P55771 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.8□□□□□ -0.2
PAX9P55771 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.8□□□□□ -0.2
PAX9P55771 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PAX9P55771 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms