Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
EPHA4P54764 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
EPHA4P54764 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
EPHA4P54764 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA4P54764 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA4P54764 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
EPHA4P54764 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EPHA4P54764 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA4P54764 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.51■□□□□ 0.23
EPHA4P54764 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.51■□□□□ 0.23
EPHA4P54764 MIR4469-201ENST00000583919 79 ntBASIC16.51■□□□□ 0.23
EPHA4P54764 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHA4P54764 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHA4P54764 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
EPHA4P54764 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHA4P54764 ELL2P1-201ENST00000413990 1906 ntBASIC16.51■□□□□ 0.23
EPHA4P54764 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA4P54764 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
EPHA4P54764 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EPHA4P54764 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA4P54764 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
EPHA4P54764 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA4P54764 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHA4P54764 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 AC254562.1-201ENST00000417586 456 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA4P54764 RPS8P6-201ENST00000426177 609 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 DNAJB3-202ENST00000449667 1266 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 AL513480.1-201ENST00000451731 511 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHA4P54764 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHA4P54764 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 AC068137.2-201ENST00000605408 478 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 AL078644.1-201ENST00000609881 752 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA4P54764 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHA4P54764 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHA4P54764 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.5■□□□□ 0.23
EPHA4P54764 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.49■□□□□ 0.23
EPHA4P54764 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA4P54764 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA4P54764 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA4P54764 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
EPHA4P54764 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA4P54764 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA4P54764 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
EPHA4P54764 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHA4P54764 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA4P54764 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
EPHA4P54764 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
EPHA4P54764 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHA4P54764 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHA4P54764 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHA4P54764 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA4P54764 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA4P54764 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA4P54764 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHA4P54764 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPHA4P54764 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
EPHA4P54764 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms