Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD23BP54727 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAD23BP54727 LAGE3P1-201ENST00000425356 484 ntBASIC18.38■□□□□ 0.53
RAD23BP54727 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAD23BP54727 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.38■□□□□ 0.53
RAD23BP54727 OR7E14P-202ENST00000530490 1290 ntBASIC18.38■□□□□ 0.53
RAD23BP54727 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.38■□□□□ 0.53
RAD23BP54727 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.38■□□□□ 0.53
RAD23BP54727 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.38■□□□□ 0.53
RAD23BP54727 SLC25A6P4-201ENST00000586535 553 ntBASIC18.38■□□□□ 0.53
RAD23BP54727 AL139424.1-201ENST00000607572 797 ntBASIC18.38■□□□□ 0.53
RAD23BP54727 AC004706.3-202ENST00000621574 984 ntBASIC18.38■□□□□ 0.53
RAD23BP54727 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.38■□□□□ 0.53
RAD23BP54727 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAD23BP54727 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD23BP54727 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD23BP54727 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.38■□□□□ 0.53
RAD23BP54727 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.38■□□□□ 0.53
RAD23BP54727 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RAD23BP54727 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD23BP54727 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAD23BP54727 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD23BP54727 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RAD23BP54727 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RAD23BP54727 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.37■□□□□ 0.53
RAD23BP54727 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 RNA5SP419-201ENST00000515908 135 ntBASIC18.37■□□□□ 0.53
RAD23BP54727 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.37■□□□□ 0.53
RAD23BP54727 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.37■□□□□ 0.53
RAD23BP54727 AL590787.1-201ENST00000568856 1315 ntBASIC18.37■□□□□ 0.53
RAD23BP54727 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD23BP54727 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD23BP54727 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAD23BP54727 EGFEM1P-202ENST00000431685 1563 ntBASIC18.37■□□□□ 0.53
RAD23BP54727 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.37■□□□□ 0.53
RAD23BP54727 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.37■□□□□ 0.53
RAD23BP54727 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAD23BP54727 AC080080.1-201ENST00000625121 2420 ntBASIC18.37■□□□□ 0.53
RAD23BP54727 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.36■□□□□ 0.53
RAD23BP54727 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.36■□□□□ 0.53
RAD23BP54727 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.36■□□□□ 0.53
RAD23BP54727 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.36■□□□□ 0.53
RAD23BP54727 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.36■□□□□ 0.53
RAD23BP54727 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 AC012640.2-201ENST00000561606 901 ntBASIC18.36■□□□□ 0.53
RAD23BP54727 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 FAM215A-202ENST00000632077 792 ntBASIC18.36■□□□□ 0.53
RAD23BP54727 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.36■□□□□ 0.53
RAD23BP54727 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAD23BP54727 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 AP001094.4-201ENST00000579008 2176 ntBASIC18.35■□□□□ 0.53
RAD23BP54727 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 LINC02012-201ENST00000608206 1725 ntBASIC18.35■□□□□ 0.53
RAD23BP54727 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAD23BP54727 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.35■□□□□ 0.53
RAD23BP54727 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 KRT18P27-201ENST00000427733 1299 ntBASIC18.35■□□□□ 0.53
RAD23BP54727 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.35■□□□□ 0.53
RAD23BP54727 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.35■□□□□ 0.53
RAD23BP54727 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.35■□□□□ 0.53
RAD23BP54727 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms