Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSNK1EP49674 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CSNK1EP49674 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 AKAP8P1-201ENST00000434743 1349 ntBASIC16.76■□□□□ 0.27
CSNK1EP49674 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 LINC00304-203ENST00000565008 1864 ntBASIC16.76■□□□□ 0.27
CSNK1EP49674 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.76■□□□□ 0.27
CSNK1EP49674 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CSNK1EP49674 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSNK1EP49674 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.76■□□□□ 0.27
CSNK1EP49674 INGX-202ENST00000489074 768 ntBASIC16.76■□□□□ 0.27
CSNK1EP49674 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.76■□□□□ 0.27
CSNK1EP49674 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 AJ011932.1-201ENST00000621707 465 ntBASIC16.76■□□□□ 0.27
CSNK1EP49674 AL161645.1-201ENST00000622716 1255 ntBASIC16.76■□□□□ 0.27
CSNK1EP49674 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1EP49674 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1EP49674 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.76■□□□□ 0.27
CSNK1EP49674 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CSNK1EP49674 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CSNK1EP49674 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSNK1EP49674 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 TUBB3P1-201ENST00000405796 1332 ntBASIC16.75■□□□□ 0.27
CSNK1EP49674 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 AC055876.3-201ENST00000431496 288 ntBASIC16.75■□□□□ 0.27
CSNK1EP49674 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 RBPMS2P1-201ENST00000437762 623 ntBASIC16.75■□□□□ 0.27
CSNK1EP49674 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.75■□□□□ 0.27
CSNK1EP49674 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.75■□□□□ 0.27
CSNK1EP49674 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 AC138649.4-201ENST00000612222 287 ntBASIC16.75■□□□□ 0.27
CSNK1EP49674 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.75■□□□□ 0.27
CSNK1EP49674 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.75■□□□□ 0.27
CSNK1EP49674 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.75■□□□□ 0.27
CSNK1EP49674 AC012317.2-201ENST00000623305 2251 ntBASIC16.75■□□□□ 0.27
CSNK1EP49674 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CSNK1EP49674 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1EP49674 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CSNK1EP49674 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.74■□□□□ 0.27
CSNK1EP49674 MIR943-201ENST00000401286 94 ntBASIC16.74■□□□□ 0.27
CSNK1EP49674 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.74■□□□□ 0.27
CSNK1EP49674 PMS2P4-201ENST00000412466 1052 ntBASIC16.74■□□□□ 0.27
CSNK1EP49674 SPCS2P4-201ENST00000436160 681 ntBASIC16.74■□□□□ 0.27
CSNK1EP49674 IGHV3-62-201ENST00000520057 340 ntBASIC16.74■□□□□ 0.27
CSNK1EP49674 AL512356.2-201ENST00000546955 174 ntBASIC16.74■□□□□ 0.27
CSNK1EP49674 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CSNK1EP49674 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CSNK1EP49674 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms