Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC1A6P48664 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC1A6P48664 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC1A6P48664 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SLC1A6P48664 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC1A6P48664 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A6P48664 FRMD8P1-201ENST00000440433 1524 ntBASIC16.93■□□□□ 0.3
SLC1A6P48664 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC1A6P48664 SLC25A3P1-201ENST00000443844 931 ntBASIC16.93■□□□□ 0.3
SLC1A6P48664 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A6P48664 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC1A6P48664 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC1A6P48664 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC1A6P48664 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC1A6P48664 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SLC1A6P48664 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC1A6P48664 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
SLC1A6P48664 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC1A6P48664 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC1A6P48664 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A6P48664 AC092364.2-201ENST00000596710 2692 ntBASIC16.92■□□□□ 0.3
SLC1A6P48664 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC1A6P48664 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC1A6P48664 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC1A6P48664 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC1A6P48664 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC1A6P48664 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC1A6P48664 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A6P48664 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A6P48664 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 AL049757.1-201ENST00000616842 1596 ntBASIC16.92■□□□□ 0.3
SLC1A6P48664 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC1A6P48664 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC1A6P48664 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC1A6P48664 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A6P48664 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A6P48664 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A6P48664 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC1A6P48664 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A6P48664 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC1A6P48664 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A6P48664 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC1A6P48664 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC1A6P48664 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC1A6P48664 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms