Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX11P35716 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.87■□□□□ 0.29
SOX11P35716 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SOX11P35716 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SOX11P35716 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SOX11P35716 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SOX11P35716 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SOX11P35716 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SOX11P35716 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SOX11P35716 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.86■□□□□ 0.29
SOX11P35716 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 IGHV3-47-201ENST00000425060 335 ntBASIC16.86■□□□□ 0.29
SOX11P35716 AC246785.2-201ENST00000432512 513 ntBASIC16.86■□□□□ 0.29
SOX11P35716 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 KRT17P6-201ENST00000453795 1220 ntBASIC16.86■□□□□ 0.29
SOX11P35716 KRT18P31-201ENST00000506277 1292 ntBASIC16.86■□□□□ 0.29
SOX11P35716 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 AC091304.2-201ENST00000564639 760 ntBASIC16.86■□□□□ 0.29
SOX11P35716 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.86■□□□□ 0.29
SOX11P35716 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SOX11P35716 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
SOX11P35716 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SOX11P35716 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SOX11P35716 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.86■□□□□ 0.29
SOX11P35716 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SOX11P35716 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.85■□□□□ 0.29
SOX11P35716 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.85■□□□□ 0.29
SOX11P35716 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 DUTP2-201ENST00000519164 463 ntBASIC16.85■□□□□ 0.29
SOX11P35716 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.85■□□□□ 0.29
SOX11P35716 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.85■□□□□ 0.29
SOX11P35716 REXO1L11P-201ENST00000620964 1927 ntBASIC16.85■□□□□ 0.29
SOX11P35716 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
SOX11P35716 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SOX11P35716 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.85■□□□□ 0.29
SOX11P35716 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 LINC00167-201ENST00000530583 1419 ntBASIC16.85■□□□□ 0.29
SOX11P35716 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX11P35716 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.85■□□□□ 0.29
SOX11P35716 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 PCDHB19P-201ENST00000570871 2371 ntBASIC16.85■□□□□ 0.29
SOX11P35716 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SOX11P35716 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.85■□□□□ 0.29
SOX11P35716 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SOX11P35716 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.84■□□□□ 0.29
SOX11P35716 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX11P35716 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX11P35716 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX11P35716 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX11P35716 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SOX11P35716 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX11P35716 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SOX11P35716 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SOX11P35716 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SOX11P35716 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.84■□□□□ 0.29
SOX11P35716 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms