Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL3L1P16619 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
CCL3L1P16619 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL3L1P16619 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.2□□□□□ -0.14
CCL3L1P16619 AL353135.1-201ENST00000606729 504 ntBASIC14.2□□□□□ -0.14
CCL3L1P16619 AL139424.1-201ENST00000607572 797 ntBASIC14.2□□□□□ -0.14
CCL3L1P16619 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL3L1P16619 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 AP001094.4-201ENST00000579008 2176 ntBASIC14.2□□□□□ -0.14
CCL3L1P16619 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CCL3L1P16619 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CCL3L1P16619 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CCL3L1P16619 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.2□□□□□ -0.14
CCL3L1P16619 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.19□□□□□ -0.14
CCL3L1P16619 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CCL3L1P16619 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL3L1P16619 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL3L1P16619 EGFEM1P-202ENST00000431685 1563 ntBASIC14.19□□□□□ -0.14
CCL3L1P16619 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL3L1P16619 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL3L1P16619 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.19□□□□□ -0.14
CCL3L1P16619 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.19□□□□□ -0.14
CCL3L1P16619 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 AL773604.1-201ENST00000617417 272 ntBASIC14.19□□□□□ -0.14
CCL3L1P16619 AC004706.3-202ENST00000621574 984 ntBASIC14.19□□□□□ -0.14
CCL3L1P16619 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.19□□□□□ -0.14
CCL3L1P16619 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
CCL3L1P16619 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CCL3L1P16619 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.19□□□□□ -0.14
CCL3L1P16619 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CCL3L1P16619 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CCL3L1P16619 AC080080.1-201ENST00000625121 2420 ntBASIC14.19□□□□□ -0.14
CCL3L1P16619 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CCL3L1P16619 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 ELK2BP-201ENST00000415014 1224 ntBASIC14.18□□□□□ -0.14
CCL3L1P16619 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.18□□□□□ -0.14
CCL3L1P16619 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.18□□□□□ -0.14
CCL3L1P16619 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.18□□□□□ -0.14
CCL3L1P16619 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CCL3L1P16619 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL3L1P16619 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.18□□□□□ -0.14
CCL3L1P16619 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms