Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 KRT16P4-201ENST00000453883 522 ntBASIC15.84■□□□□ 0.13
THBS1P07996 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS1P07996 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.84■□□□□ 0.13
THBS1P07996 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS1P07996 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.84■□□□□ 0.13
THBS1P07996 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.84■□□□□ 0.13
THBS1P07996 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.84■□□□□ 0.13
THBS1P07996 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
THBS1P07996 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS1P07996 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS1P07996 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.84■□□□□ 0.13
THBS1P07996 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS1P07996 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS1P07996 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS1P07996 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
THBS1P07996 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS1P07996 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
THBS1P07996 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.84■□□□□ 0.13
THBS1P07996 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.84■□□□□ 0.13
THBS1P07996 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
THBS1P07996 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
THBS1P07996 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
THBS1P07996 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.83■□□□□ 0.12
THBS1P07996 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.83■□□□□ 0.12
THBS1P07996 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.83■□□□□ 0.12
THBS1P07996 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
THBS1P07996 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.83■□□□□ 0.12
THBS1P07996 MIR3652-201ENST00000579335 131 ntBASIC15.83■□□□□ 0.12
THBS1P07996 AL591684.3-201ENST00000605187 298 ntBASIC15.83■□□□□ 0.12
THBS1P07996 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.83■□□□□ 0.12
THBS1P07996 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
THBS1P07996 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 AC099398.1-201ENST00000567919 2776 ntBASIC15.83■□□□□ 0.12
THBS1P07996 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
THBS1P07996 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
THBS1P07996 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
THBS1P07996 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
THBS1P07996 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 AP002490.2-201ENST00000524791 560 ntBASIC15.82■□□□□ 0.12
THBS1P07996 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.82■□□□□ 0.12
THBS1P07996 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.82■□□□□ 0.12
THBS1P07996 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.82■□□□□ 0.12
THBS1P07996 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 TUBB8P12-201ENST00000308911 1335 ntBASIC15.82■□□□□ 0.12
THBS1P07996 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 TUBB7P-202ENST00000428444 1305 ntBASIC15.82■□□□□ 0.12
THBS1P07996 TUBB8P7-204ENST00000567960 1332 ntBASIC15.82■□□□□ 0.12
THBS1P07996 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
THBS1P07996 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.82■□□□□ 0.12
THBS1P07996 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.82■□□□□ 0.12
THBS1P07996 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
THBS1P07996 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.81■□□□□ 0.12
THBS1P07996 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
THBS1P07996 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms