Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MPDU1-223ENST00000582151 728 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 RNA5-8SN1-201ENST00000610460 153 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 RNA5-8SN5-202ENST00000612463 153 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 RNA5-8SN4-201ENST00000613359 153 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 RNA5-8SN5-201ENST00000619471 153 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.31■■□□□ 1.16
COL5A2P05997 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.31■■□□□ 1.16
COL5A2P05997 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
COL5A2P05997 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 AC138969.3-201ENST00000546612 1459 ntBASIC22.3■■□□□ 1.16
COL5A2P05997 AC138932.2-201ENST00000548268 1459 ntBASIC22.3■■□□□ 1.16
COL5A2P05997 AC126755.4-201ENST00000549796 1459 ntBASIC22.3■■□□□ 1.16
COL5A2P05997 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
COL5A2P05997 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
COL5A2P05997 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 AC079776.1-201ENST00000401540 1152 ntBASIC22.3■■□□□ 1.16
COL5A2P05997 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.3■■□□□ 1.16
COL5A2P05997 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 IFT20-216ENST00000588477 774 ntTSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 CYP2A7P1-201ENST00000595391 815 ntBASIC22.3■■□□□ 1.16
COL5A2P05997 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 AC087499.5-201ENST00000452760 1342 ntBASIC22.3■■□□□ 1.16
COL5A2P05997 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC22.3■■□□□ 1.16
COL5A2P05997 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
COL5A2P05997 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.3■■□□□ 1.16
COL5A2P05997 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
COL5A2P05997 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
COL5A2P05997 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
COL5A2P05997 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 CDK2AP2P3-201ENST00000422476 372 ntBASIC22.29■■□□□ 1.16
COL5A2P05997 PTPA-220ENST00000436883 532 ntTSL 4 BASIC22.29■■□□□ 1.16
COL5A2P05997 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC22.29■■□□□ 1.16
COL5A2P05997 GIMAP3P-201ENST00000495150 836 ntBASIC22.29■■□□□ 1.16
COL5A2P05997 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.29■■□□□ 1.16
COL5A2P05997 AC021097.1-201ENST00000607902 574 ntBASIC22.29■■□□□ 1.16
COL5A2P05997 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 AP001350.2-201ENST00000625104 1094 ntBASIC22.29■■□□□ 1.16
COL5A2P05997 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
COL5A2P05997 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC22.29■■□□□ 1.16
COL5A2P05997 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
COL5A2P05997 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.29■■□□□ 1.16
COL5A2P05997 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COL5A2P05997 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.29■■□□□ 1.16
COL5A2P05997 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
COL5A2P05997 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC22.29■■□□□ 1.16
COL5A2P05997 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
COL5A2P05997 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COL5A2P05997 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COL5A2P05997 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 PRYP6-201ENST00000514804 343 ntBASIC22.28■■□□□ 1.16
COL5A2P05997 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC22.28■■□□□ 1.16
COL5A2P05997 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
COL5A2P05997 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
COL5A2P05997 AL035456.1-201ENST00000456064 1369 ntBASIC22.28■■□□□ 1.16
COL5A2P05997 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 FOS-208ENST00000555686 1496 ntTSL 2 BASIC22.28■■□□□ 1.16
COL5A2P05997 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
COL5A2P05997 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
COL5A2P05997 SLC9A3P2-201ENST00000447821 2021 ntBASIC22.28■■□□□ 1.16
COL5A2P05997 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC22.28■■□□□ 1.16
COL5A2P05997 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
COL5A2P05997 FAM220BP-201ENST00000377689 816 ntBASIC22.28■■□□□ 1.16
COL5A2P05997 RPL37AP1-201ENST00000412502 279 ntBASIC22.28■■□□□ 1.16
COL5A2P05997 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC22.28■■□□□ 1.16
COL5A2P05997 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
COL5A2P05997 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
COL5A2P05997 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL5A2P05997 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.27■■□□□ 1.16
COL5A2P05997 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms