Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CD74P04233 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CD74P04233 KRT18P48-201ENST00000434763 852 ntBASIC14.47□□□□□ -0.09
CD74P04233 AC068472.1-201ENST00000474589 881 ntBASIC14.47□□□□□ -0.09
CD74P04233 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.47□□□□□ -0.09
CD74P04233 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.47□□□□□ -0.09
CD74P04233 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
CD74P04233 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 ME2P1-201ENST00000426028 1970 ntBASIC14.47□□□□□ -0.09
CD74P04233 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CD74P04233 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CD74P04233 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CD74P04233 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.46□□□□□ -0.09
CD74P04233 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CD74P04233 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 TUBB8P12-201ENST00000308911 1335 ntBASIC14.46□□□□□ -0.09
CD74P04233 TUBB7P-202ENST00000428444 1305 ntBASIC14.46□□□□□ -0.09
CD74P04233 TUBB8P7-204ENST00000567960 1332 ntBASIC14.46□□□□□ -0.09
CD74P04233 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CD74P04233 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CD74P04233 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 TSPY20P-201ENST00000450910 630 ntBASIC14.46□□□□□ -0.09
CD74P04233 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.46□□□□□ -0.09
CD74P04233 AC128688.1-201ENST00000487626 519 ntBASIC14.46□□□□□ -0.09
CD74P04233 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 AC109462.3-201ENST00000573934 613 ntBASIC14.46□□□□□ -0.09
CD74P04233 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
CD74P04233 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CD74P04233 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CD74P04233 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CD74P04233 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD74P04233 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.46□□□□□ -0.1
CD74P04233 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD74P04233 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD74P04233 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CD74P04233 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CD74P04233 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD74P04233 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CD74P04233 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.46□□□□□ -0.1
CD74P04233 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.45□□□□□ -0.1
CD74P04233 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 GPR89P-201ENST00000407924 1495 ntBASIC14.45□□□□□ -0.1
CD74P04233 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CD74P04233 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms