Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE6O95741 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE6O95741 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 NCF1C-201ENST00000438382 1427 ntBASIC16.9■□□□□ 0.3
CPNE6O95741 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE6O95741 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE6O95741 UPF3AP3-201ENST00000420996 769 ntBASIC16.9■□□□□ 0.3
CPNE6O95741 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 AC108751.1-201ENST00000490852 363 ntBASIC16.9■□□□□ 0.3
CPNE6O95741 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE6O95741 AC004706.3-202ENST00000621574 984 ntBASIC16.9■□□□□ 0.3
CPNE6O95741 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CPNE6O95741 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE6O95741 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CPNE6O95741 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CPNE6O95741 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.89■□□□□ 0.29
CPNE6O95741 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.89■□□□□ 0.29
CPNE6O95741 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CPNE6O95741 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 DDX43P3-201ENST00000441064 443 ntBASIC16.89■□□□□ 0.29
CPNE6O95741 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.89■□□□□ 0.29
CPNE6O95741 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.89■□□□□ 0.29
CPNE6O95741 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CPNE6O95741 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE6O95741 MIR3687-2-201ENST00000577708 61 ntBASIC16.89■□□□□ 0.29
CPNE6O95741 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE6O95741 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.89■□□□□ 0.29
CPNE6O95741 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE6O95741 AL139424.1-201ENST00000607572 797 ntBASIC16.89■□□□□ 0.29
CPNE6O95741 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.89■□□□□ 0.29
CPNE6O95741 MIR3687-1-201ENST00000614492 61 ntBASIC16.89■□□□□ 0.29
CPNE6O95741 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE6O95741 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE6O95741 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE6O95741 AC148477.5-201ENST00000625164 1645 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE6O95741 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.88■□□□□ 0.29
CPNE6O95741 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE6O95741 YBX2P1-201ENST00000394192 760 ntBASIC16.88■□□□□ 0.29
CPNE6O95741 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms