Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 KRT18P48-201ENST00000434763 852 ntBASIC15.27■□□□□ 0.04
ALX3O95076 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ALX3O95076 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ALX3O95076 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.27■□□□□ 0.04
ALX3O95076 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.27■□□□□ 0.04
ALX3O95076 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ALX3O95076 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ALX3O95076 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.27■□□□□ 0.04
ALX3O95076 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ALX3O95076 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.27■□□□□ 0.03
ALX3O95076 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
ALX3O95076 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
ALX3O95076 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.26■□□□□ 0.03
ALX3O95076 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.26■□□□□ 0.03
ALX3O95076 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ALX3O95076 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ALX3O95076 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.26■□□□□ 0.03
ALX3O95076 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.26■□□□□ 0.03
ALX3O95076 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.26■□□□□ 0.03
ALX3O95076 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ALX3O95076 AC140113.3-201ENST00000605663 199 ntBASIC15.26■□□□□ 0.03
ALX3O95076 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ALX3O95076 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ALX3O95076 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.26■□□□□ 0.03
ALX3O95076 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ALX3O95076 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ALX3O95076 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.26■□□□□ 0.03
ALX3O95076 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ALX3O95076 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ALX3O95076 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ALX3O95076 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.25■□□□□ 0.03
ALX3O95076 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.25■□□□□ 0.03
ALX3O95076 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.25■□□□□ 0.03
ALX3O95076 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 FAM45BP-202ENST00000592932 1624 ntBASIC15.25■□□□□ 0.03
ALX3O95076 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ALX3O95076 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
ALX3O95076 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 AC092384.3-202ENST00000564646 2873 ntBASIC15.25■□□□□ 0.03
ALX3O95076 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.25■□□□□ 0.03
ALX3O95076 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 STARP1-201ENST00000397973 869 ntBASIC15.25■□□□□ 0.03
ALX3O95076 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.25■□□□□ 0.03
ALX3O95076 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.25■□□□□ 0.03
ALX3O95076 AC112698.1-201ENST00000510299 916 ntBASIC15.25■□□□□ 0.03
ALX3O95076 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.25■□□□□ 0.03
ALX3O95076 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.25■□□□□ 0.03
ALX3O95076 AC079602.3-201ENST00000623931 403 ntBASIC15.25■□□□□ 0.03
ALX3O95076 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ALX3O95076 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ALX3O95076 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms