Protein–RNA interactions for Protein: O43246

SLC7A4, Cationic amino acid transporter 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC7A4O43246 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SLC7A4O43246 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC7A4O43246 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLC7A4O43246 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC7A4O43246 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC7A4O43246 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC7A4O43246 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC7A4O43246 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC7A4O43246 AC006504.4-201ENST00000592118 1568 ntBASIC17.46■□□□□ 0.39
SLC7A4O43246 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC7A4O43246 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC7A4O43246 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SLC7A4O43246 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC7A4O43246 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC7A4O43246 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC7A4O43246 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
SLC7A4O43246 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC7A4O43246 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.46■□□□□ 0.39
SLC7A4O43246 AC008667.4-201ENST00000607370 168 ntBASIC17.46■□□□□ 0.39
SLC7A4O43246 AC046185.3-201ENST00000623228 1824 ntBASIC17.46■□□□□ 0.39
SLC7A4O43246 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC7A4O43246 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC7A4O43246 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC7A4O43246 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC7A4O43246 AC080080.1-201ENST00000625121 2420 ntBASIC17.46■□□□□ 0.38
SLC7A4O43246 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SLC7A4O43246 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC7A4O43246 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC7A4O43246 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.46■□□□□ 0.38
SLC7A4O43246 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 GPR89P-201ENST00000407924 1495 ntBASIC17.45■□□□□ 0.38
SLC7A4O43246 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC7A4O43246 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 MIR1233-2-201ENST00000408138 82 ntBASIC17.45■□□□□ 0.38
SLC7A4O43246 MIR1233-1-201ENST00000408722 82 ntBASIC17.45■□□□□ 0.38
SLC7A4O43246 IGHV3-65-201ENST00000523210 341 ntBASIC17.45■□□□□ 0.38
SLC7A4O43246 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC7A4O43246 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC7A4O43246 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SLC7A4O43246 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 AL805961.1-202ENST00000641562 540 ntBASIC17.45■□□□□ 0.38
SLC7A4O43246 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC7A4O43246 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SLC7A4O43246 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SLC7A4O43246 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC7A4O43246 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC7A4O43246 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SLC7A4O43246 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC7A4O43246 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC7A4O43246 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC7A4O43246 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC7A4O43246 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 RPS15P9-201ENST00000494093 319 ntBASIC17.44■□□□□ 0.38
SLC7A4O43246 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.44■□□□□ 0.38
SLC7A4O43246 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC7A4O43246 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC7A4O43246 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC7A4O43246 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms