Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 AP001412.1-201ENST00000608405 714 ntBASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.8□□□□□ -0.04
MEIS3P1A6NDR6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 AC233702.5-201ENST00000584107 538 ntBASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 NORAD-201ENST00000565493 5339 ntBASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 CYP2T1P-202ENST00000641596 2535 ntBASIC14.79□□□□□ -0.04
MEIS3P1A6NDR6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 MIR1238-201ENST00000408483 83 ntBASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 AC112698.1-201ENST00000510299 916 ntBASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 AC142381.4-202ENST00000563973 229 ntBASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MEIS3P1A6NDR6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
MEIS3P1A6NDR6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms