Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 TSPY14P-201ENST00000303979 915 ntBASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AC233702.5-201ENST00000584107 538 ntBASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AC019129.2-201ENST00000609837 1235 ntBASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 AC005052.1-201ENST00000625181 2492 ntBASIC15.14■□□□□ 0.01
TRDV1A0A1B0GX56 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 AC010460.3-201ENST00000511359 1579 ntBASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 AP003071.4-201ENST00000562276 1284 ntBASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 ME2P1-201ENST00000426028 1970 ntBASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.13■□□□□ 0.01
TRDV1A0A1B0GX56 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 AC092384.3-202ENST00000564646 2873 ntBASIC15.12■□□□□ 0.01
TRDV1A0A1B0GX56 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 785.7 ms