Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 PRYP6-201ENST00000514804 343 ntBASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 AL844908.2-201ENST00000609461 460 ntBASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC004790.1-201ENST00000612686 536 ntBASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 HLA-J-202ENST00000469281 1241 ntBASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC016396.2-201ENST00000562575 1417 ntBASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
BIVM-ERCC5R4GMW8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC008764.6-201ENST00000595909 2069 ntBASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC004408.2-201ENST00000623613 2777 ntBASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC135050.7-201ENST00000624508 2218 ntBASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC021097.1-201ENST00000607902 574 ntBASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC004840.1-201ENST00000636359 365 ntBASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
BIVM-ERCC5R4GMW8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AP3S2-216ENST00000617003 1561 ntBASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 MPDU1-223ENST00000582151 728 ntBASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC009118.2-201ENST00000613275 655 ntBASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 SLC9A3P2-201ENST00000447821 2021 ntBASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC28.23■■■□□ 2.11
BIVM-ERCC5R4GMW8 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 NAA50-208ENST00000497255 789 ntTSL 5 BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
BIVM-ERCC5R4GMW8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 RN7SL692P-201ENST00000464677 288 ntBASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC28.21■■■□□ 2.11
BIVM-ERCC5R4GMW8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms