Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
AP4S1Q9Y587 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 PVRIG2P-201ENST00000435460 978 ntBASIC16.31■□□□□ 0.2
AP4S1Q9Y587 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 BX088651.1-201ENST00000540551 451 ntBASIC16.31■□□□□ 0.2
AP4S1Q9Y587 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP4S1Q9Y587 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 AC002558.1-201ENST00000488906 803 ntBASIC16.3■□□□□ 0.2
AP4S1Q9Y587 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 AP005242.2-201ENST00000580065 1175 ntBASIC16.3■□□□□ 0.2
AP4S1Q9Y587 MIR3917-201ENST00000580971 93 ntBASIC16.3■□□□□ 0.2
AP4S1Q9Y587 AC024243.1-201ENST00000609234 778 ntBASIC16.3■□□□□ 0.2
AP4S1Q9Y587 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
AP4S1Q9Y587 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 AC092338.2-201ENST00000568827 1415 ntBASIC16.29■□□□□ 0.2
AP4S1Q9Y587 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP4S1Q9Y587 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms