Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AKAP8P1-201ENST00000434743 1349 ntBASIC17.03■□□□□ 0.32
NCDNQ9UBB6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 AC241585.1-201ENST00000433527 519 ntBASIC17.03■□□□□ 0.32
NCDNQ9UBB6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NCDNQ9UBB6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 AC090164.3-201ENST00000610780 2143 ntBASIC17.02■□□□□ 0.32
NCDNQ9UBB6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NCDNQ9UBB6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCDNQ9UBB6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 AL645728.2-201ENST00000641974 660 ntBASIC17.01■□□□□ 0.31
NCDNQ9UBB6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
NCDNQ9UBB6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCDNQ9UBB6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NCDNQ9UBB6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCDNQ9UBB6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 246.5 ms