Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
KRCC1Q9NPI7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.83■□□□□ 0.12
KRCC1Q9NPI7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 AC011840.4-201ENST00000578471 627 ntBASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 EGFEM1P-202ENST00000431685 1563 ntBASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
KRCC1Q9NPI7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 AC005521.1-201ENST00000393351 872 ntBASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
KRCC1Q9NPI7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms