Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 POM121L3P-201ENST00000419331 1163 ntBASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 IGHV3-47-201ENST00000425060 335 ntBASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 PRELID1P1-202ENST00000567272 903 ntBASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 MIR3652-201ENST00000579335 131 ntBASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 AC092329.2-201ENST00000598402 547 ntBASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 AC012313.10-201ENST00000623509 926 ntBASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NEUROD4Q9HD90 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NEUROD4Q9HD90 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 AC104819.1-201ENST00000504587 486 ntBASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NEUROD4Q9HD90 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms