Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 LINC01311-201ENST00000565162 1445 ntBASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMIM3Q9BZL3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 AP000692.2-201ENST00000608391 879 ntBASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 AL353708.3-201ENST00000610272 989 ntBASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 IKBKGP1-201ENST00000612193 1073 ntBASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMIM3Q9BZL3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.11□□□□□ -0.15
SMIM3Q9BZL3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms