Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 AP000842.3-202ENST00000569238 1080 ntBASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 LYSMD4-203ENST00000378904 2122 ntBASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RTFDC1Q9BY42 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 AC069120.2-201ENST00000524091 540 ntBASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 MIR3909-201ENST00000579518 119 ntBASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 AIRN-201ENST00000601203 4374 ntBASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
RTFDC1Q9BY42 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 HCG4-201ENST00000418983 998 ntBASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTFDC1Q9BY42 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 GNAS-203ENST00000306120 1878 ntBASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 IGHV3-42-201ENST00000520410 361 ntBASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTFDC1Q9BY42 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
RTFDC1Q9BY42 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 GK-202ENST00000378941 458 ntTSL 3 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 RNU1-129P-201ENST00000384064 167 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 SLC25A6P5-201ENST00000435663 894 ntBASIC20.7■□□□□ 0.9
RTFDC1Q9BY42 HLA-J-202ENST00000469281 1241 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms