Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14□□□□□ -0.17
RAB40CQ96S21 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 AC092171.3-201ENST00000610122 2651 ntBASIC14□□□□□ -0.17
RAB40CQ96S21 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14□□□□□ -0.17
RAB40CQ96S21 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14□□□□□ -0.17
RAB40CQ96S21 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14□□□□□ -0.17
RAB40CQ96S21 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB40CQ96S21 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14□□□□□ -0.17
RAB40CQ96S21 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
RAB40CQ96S21 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14□□□□□ -0.17
RAB40CQ96S21 AL157888.1-201ENST00000631930 593 ntBASIC14□□□□□ -0.17
RAB40CQ96S21 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB40CQ96S21 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14□□□□□ -0.17
RAB40CQ96S21 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14□□□□□ -0.17
RAB40CQ96S21 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 AP000523.1-201ENST00000398242 1049 ntBASIC13.99□□□□□ -0.17
RAB40CQ96S21 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 AL390955.1-201ENST00000428694 934 ntBASIC13.99□□□□□ -0.17
RAB40CQ96S21 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAB40CQ96S21 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB40CQ96S21 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RAB40CQ96S21 AC096633.1-201ENST00000422446 749 ntBASIC13.98□□□□□ -0.17
RAB40CQ96S21 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 TSPY15P-201ENST00000457163 923 ntBASIC13.98□□□□□ -0.17
RAB40CQ96S21 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.98□□□□□ -0.17
RAB40CQ96S21 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms