Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 AC022898.2-201ENST00000616822 1312 ntBASIC13.08□□□□□ -0.32
AP1S3Q96PC3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
AP1S3Q96PC3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 AL135905.2-201ENST00000584934 1404 ntBASIC13.07□□□□□ -0.32
AP1S3Q96PC3 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 MIR935-201ENST00000401179 91 ntBASIC13.07□□□□□ -0.32
AP1S3Q96PC3 MESTP1-201ENST00000404287 994 ntBASIC13.07□□□□□ -0.32
AP1S3Q96PC3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 LINC00602-201ENST00000629776 2065 ntBASIC13.07□□□□□ -0.32
AP1S3Q96PC3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 AP001094.4-201ENST00000579008 2176 ntBASIC13.07□□□□□ -0.32
AP1S3Q96PC3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP1S3Q96PC3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
AP1S3Q96PC3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms