Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
C9orf85Q96MD7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 AP002490.2-201ENST00000524791 560 ntBASIC12.48□□□□□ -0.41
C9orf85Q96MD7 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
C9orf85Q96MD7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
C9orf85Q96MD7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms