Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 AC092919.2-201ENST00000623631 1645 ntBASIC17.1■□□□□ 0.33
ARRDC3Q96B67 CROCCP2-202ENST00000412962 2773 ntBASIC17.1■□□□□ 0.33
ARRDC3Q96B67 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 MKNK2P1-201ENST00000437526 628 ntBASIC17.09■□□□□ 0.33
ARRDC3Q96B67 DNAJB3-202ENST00000449667 1266 ntBASIC17.09■□□□□ 0.33
ARRDC3Q96B67 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AL031432.2-201ENST00000566714 459 ntBASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AL928711.1-201ENST00000570165 459 ntBASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 AC068137.2-201ENST00000605408 478 ntBASIC17.09■□□□□ 0.33
ARRDC3Q96B67 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.09■□□□□ 0.33
ARRDC3Q96B67 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.08■□□□□ 0.33
ARRDC3Q96B67 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ARRDC3Q96B67 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 AC091812.2-201ENST00000619081 385 ntBASIC17.08■□□□□ 0.32
ARRDC3Q96B67 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ARRDC3Q96B67 LINC00896-202ENST00000609602 2128 ntBASIC17.08■□□□□ 0.32
ARRDC3Q96B67 ELL2P1-201ENST00000413990 1906 ntBASIC17.08■□□□□ 0.32
ARRDC3Q96B67 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ARRDC3Q96B67 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms