Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 MIR4538-201ENST00000581377 78 ntBASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
ARHGEF40Q8TER5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ARHGEF40Q8TER5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC25.08■■□□□ 1.6
ARHGEF40Q8TER5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
ARHGEF40Q8TER5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 AC114501.2-201ENST00000439631 535 ntBASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 MIR6775-201ENST00000617557 69 ntBASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 USP32P1-208ENST00000506594 1164 ntBASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC25.07■■□□□ 1.6
ARHGEF40Q8TER5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 AC007389.4-201ENST00000454674 793 ntBASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 AC099548.2-209ENST00000480264 625 ntBASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 CD81-207ENST00000481687 890 ntTSL 2 BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARHGEF40Q8TER5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 OSM-203ENST00000403463 464 ntTSL 3 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 NME6-203ENST00000415644 849 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 AC021097.1-201ENST00000607902 574 ntBASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARHGEF40Q8TER5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC25.04■■□□□ 1.6
ARHGEF40Q8TER5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms