Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 AC254562.1-201ENST00000417586 456 ntBASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 FAM58CP-201ENST00000435741 640 ntBASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 SNHG9-202ENST00000564014 471 ntBASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 AC129492.6-201ENST00000611383 1305 ntBASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC38A9Q8NBW4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 AC107918.2-201ENST00000530817 355 ntBASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 AP002472.1-201ENST00000577490 586 ntBASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 AC092902.6-201ENST00000641783 218 ntBASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 AC026471.1-201ENST00000564629 3026 ntBASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC38A9Q8NBW4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 CNN2P11-201ENST00000429351 262 ntBASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 AC027796.2-201ENST00000575326 344 ntBASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 KRT18P28-201ENST00000453838 1332 ntBASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC38A9Q8NBW4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.14■□□□□ 0.18
SLC38A9Q8NBW4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC38A9Q8NBW4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SLC38A9Q8NBW4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms