Protein–RNA interactions for Protein: Q8N9S9

SNX31, Sorting nexin-31, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX31Q8N9S9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 FAM220CP-201ENST00000395253 831 ntBASIC17.03■□□□□ 0.32
SNX31Q8N9S9 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 AC246785.2-201ENST00000432512 513 ntBASIC17.03■□□□□ 0.32
SNX31Q8N9S9 KRT18P35-201ENST00000510488 1269 ntBASIC17.03■□□□□ 0.32
SNX31Q8N9S9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.03■□□□□ 0.32
SNX31Q8N9S9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 FLJ38576-201ENST00000623820 2459 ntBASIC17.03■□□□□ 0.32
SNX31Q8N9S9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.03■□□□□ 0.32
SNX31Q8N9S9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 ARMC10P1-201ENST00000313754 855 ntBASIC17.02■□□□□ 0.32
SNX31Q8N9S9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 LINC00265-3P-201ENST00000447588 903 ntBASIC17.02■□□□□ 0.32
SNX31Q8N9S9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 AP002414.4-201ENST00000589764 1148 ntBASIC17.02■□□□□ 0.32
SNX31Q8N9S9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SNX31Q8N9S9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SNX31Q8N9S9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AC105020.1-201ENST00000435356 2205 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 MYCLP1-201ENST00000372451 1075 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 MINOS1P3-201ENST00000457048 203 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 TOB2P1-201ENST00000469761 992 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AC009533.2-201ENST00000543664 586 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AC111152.3-201ENST00000569699 673 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AC019129.2-201ENST00000609837 1235 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AL358472.4-201ENST00000633140 710 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 AP000550.4-202ENST00000639755 178 ntBASIC17.01■□□□□ 0.31
SNX31Q8N9S9 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SNX31Q8N9S9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms