Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RTL3Q8N8U3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 AP002414.1-201ENST00000391405 1147 ntBASIC17.63■□□□□ 0.41
RTL3Q8N8U3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 AC124947.2-201ENST00000547118 1133 ntBASIC17.63■□□□□ 0.41
RTL3Q8N8U3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTL3Q8N8U3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 AC092910.1-201ENST00000482027 1129 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 RPS15P9-201ENST00000494093 319 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TERC-201ENST00000602385 541 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 AC116407.3-201ENST00000623905 1129 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 PGM5P2-202ENST00000637225 1043 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 AC243591.1-201ENST00000452967 1364 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 AC092053.1-201ENST00000605787 1936 ntBASIC17.62■□□□□ 0.41
RTL3Q8N8U3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTL3Q8N8U3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.61■□□□□ 0.41
RTL3Q8N8U3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms