Protein–RNA interactions for Protein: Q8N7C7

RNF148, RING finger protein 148, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF148Q8N7C7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF148Q8N7C7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 MIR1238-201ENST00000408483 83 ntBASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 FITM1-202ENST00000559294 800 ntBASIC16.53■□□□□ 0.24
RNF148Q8N7C7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 AC024563.2-201ENST00000603282 481 ntBASIC16.53■□□□□ 0.24
RNF148Q8N7C7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF148Q8N7C7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 AC142381.4-202ENST00000563973 229 ntBASIC16.52■□□□□ 0.24
RNF148Q8N7C7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF148Q8N7C7 AC004263.2-201ENST00000617183 678 ntBASIC16.52■□□□□ 0.24
RNF148Q8N7C7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF148Q8N7C7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 C2orf69P3-201ENST00000565542 1120 ntBASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AC009154.2-201ENST00000621177 724 ntBASIC16.51■□□□□ 0.23
RNF148Q8N7C7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 KRT8P9-201ENST00000558927 1449 ntBASIC16.51■□□□□ 0.23
RNF148Q8N7C7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AC105917.1-201ENST00000506637 2539 ntBASIC16.51■□□□□ 0.23
RNF148Q8N7C7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms