Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.72■□□□□ 0.27
TRIML2Q8N7C3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AL137013.1-201ENST00000432946 1228 ntBASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC010203.1-204ENST00000548782 407 ntBASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC005363.2-201ENST00000618631 242 ntBASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIML2Q8N7C3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRIML2Q8N7C3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 AC113347.1-201ENST00000413321 391 ntBASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 AP003733.1-201ENST00000491725 852 ntBASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIML2Q8N7C3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms