Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCUBE3Q8IX30 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AP002414.3-201ENST00000589352 1468 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC073621.1-201ENST00000392730 636 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 KRT18P27-201ENST00000427733 1299 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC105339.3-201ENST00000560043 636 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AP001005.1-201ENST00000571755 1248 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC006557.2-201ENST00000592985 1240 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC244517.3-201ENST00000616254 1235 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AL589935.2-201ENST00000616471 1231 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC139530.3-201ENST00000620344 690 ntBASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SCUBE3Q8IX30 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SCUBE3Q8IX30 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 PTCHD3P3-201ENST00000403073 906 ntBASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SCUBE3Q8IX30 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 GPR89P-201ENST00000407924 1495 ntBASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SCUBE3Q8IX30 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms