Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ALOX12P2-203ENST00000570921 1945 ntBASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AC093525.9-201ENST00000624961 1746 ntBASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AL353807.1-201ENST00000427475 662 ntBASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LYSMD2Q8IV50 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 AC096733.2-201ENST00000609937 1394 ntBASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 AP002414.2-201ENST00000591780 3365 ntBASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 MMAB-206ENST00000540016 945 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 RARRES2P10-201ENST00000564312 460 ntBASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 AC104771.1-201ENST00000603335 964 ntBASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 AC006538.1-201ENST00000567905 1585 ntBASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LYSMD2Q8IV50 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LYSMD2Q8IV50 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms