Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 AC099336.1-202ENST00000602961 463 ntBASIC15.94■□□□□ 0.14
VRK2Q86Y07 AC114341.1-201ENST00000618070 349 ntBASIC15.94■□□□□ 0.14
VRK2Q86Y07 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 PMPCAP1-201ENST00000508114 1576 ntBASIC15.94■□□□□ 0.14
VRK2Q86Y07 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VRK2Q86Y07 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VRK2Q86Y07 AC148477.5-201ENST00000625164 1645 ntBASIC15.94■□□□□ 0.14
VRK2Q86Y07 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 ARMC10P1-201ENST00000313754 855 ntBASIC15.93■□□□□ 0.14
VRK2Q86Y07 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 AC124947.2-201ENST00000547118 1133 ntBASIC15.93■□□□□ 0.14
VRK2Q86Y07 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 AL445228.2-201ENST00000605589 952 ntBASIC15.93■□□□□ 0.14
VRK2Q86Y07 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 PCDHA14-201ENST00000506751 2298 ntBASIC15.93■□□□□ 0.14
VRK2Q86Y07 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 UBALD1-205ENST00000590891 2641 ntBASIC15.93■□□□□ 0.14
VRK2Q86Y07 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.93■□□□□ 0.14
VRK2Q86Y07 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VRK2Q86Y07 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 AC012615.1-201ENST00000565797 1299 ntBASIC15.92■□□□□ 0.14
VRK2Q86Y07 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 AC092329.2-201ENST00000598402 547 ntBASIC15.92■□□□□ 0.14
VRK2Q86Y07 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
VRK2Q86Y07 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
VRK2Q86Y07 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms