Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 AC092597.1-201ENST00000487352 616 ntBASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 AL441883.1-201ENST00000566170 1045 ntBASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 AC140113.3-201ENST00000605663 199 ntBASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRTM1Q86UE6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 MIR662-201ENST00000384847 95 ntBASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 FAM8A6P-201ENST00000407496 1135 ntBASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 AC007967.3-201ENST00000434308 558 ntBASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ZNF444P1-201ENST00000559497 298 ntBASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 FRMD8P1-201ENST00000440433 1524 ntBASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRTM1Q86UE6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRTM1Q86UE6 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms