Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 AP003733.1-201ENST00000491725 852 ntBASIC15.94■□□□□ 0.14
TUBA1AQ71U36 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TUBA1AQ71U36 AC006449.5-201ENST00000610658 2098 ntBASIC15.93■□□□□ 0.14
TUBA1AQ71U36 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 CYP2T1P-202ENST00000641596 2535 ntBASIC15.93■□□□□ 0.14
TUBA1AQ71U36 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AC093458.2-201ENST00000623150 629 ntBASIC15.93■□□□□ 0.14
TUBA1AQ71U36 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AP000550.4-202ENST00000639755 178 ntBASIC15.93■□□□□ 0.14
TUBA1AQ71U36 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.93■□□□□ 0.14
TUBA1AQ71U36 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 AC060834.1-201ENST00000443027 2032 ntBASIC15.92■□□□□ 0.14
TUBA1AQ71U36 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TUBA1AQ71U36 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms