Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.51■■□□□ 1.03
SMIM5Q71RC9 AC022144.1-201ENST00000602255 1580 ntBASIC21.51■■□□□ 1.03
SMIM5Q71RC9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
SMIM5Q71RC9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM5Q71RC9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM5Q71RC9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SMIM5Q71RC9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SMIM5Q71RC9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 RNU1-129P-201ENST00000384064 167 ntBASIC21.49■■□□□ 1.03
SMIM5Q71RC9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 U1.21-201ENST00000580816 167 ntBASIC21.49■■□□□ 1.03
SMIM5Q71RC9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 AC003101.2-201ENST00000612557 442 ntBASIC21.49■■□□□ 1.03
SMIM5Q71RC9 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SMIM5Q71RC9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC21.48■■□□□ 1.03
SMIM5Q71RC9 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 HNRNPA3P5-201ENST00000455201 833 ntBASIC21.48■■□□□ 1.03
SMIM5Q71RC9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 AC027307.3-201ENST00000594262 1100 ntBASIC21.48■■□□□ 1.03
SMIM5Q71RC9 AC008738.7-201ENST00000609744 511 ntBASIC21.48■■□□□ 1.03
SMIM5Q71RC9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.48■■□□□ 1.03
SMIM5Q71RC9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 AC009407.1-201ENST00000568958 598 ntBASIC21.47■■□□□ 1.03
SMIM5Q71RC9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 AL031055.1-201ENST00000606362 631 ntBASIC21.47■■□□□ 1.03
SMIM5Q71RC9 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.47■■□□□ 1.03
SMIM5Q71RC9 AC009118.2-201ENST00000613275 655 ntBASIC21.47■■□□□ 1.03
SMIM5Q71RC9 MIR6752-201ENST00000618442 71 ntBASIC21.47■■□□□ 1.03
SMIM5Q71RC9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 AL358472.5-202ENST00000641448 1267 ntBASIC21.47■■□□□ 1.03
SMIM5Q71RC9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMIM5Q71RC9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms