Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNKSR3Q6P9H4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 TOP3BP1-201ENST00000420768 1380 ntBASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 SERBP1P5-201ENST00000510079 1181 ntBASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CNKSR3Q6P9H4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CNKSR3Q6P9H4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 CR383656.12-201ENST00000549567 513 ntBASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AC009118.2-201ENST00000613275 655 ntBASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AC073592.8-201ENST00000624126 511 ntBASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AP001350.2-201ENST00000625104 1094 ntBASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 SLC22A20-204ENST00000530038 1673 ntBASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AC016027.1-202ENST00000607927 1699 ntBASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNKSR3Q6P9H4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 MRPS18AP1-201ENST00000414458 589 ntBASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNKSR3Q6P9H4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNKSR3Q6P9H4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms