Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 AC027612.4-201ENST00000605371 583 ntBASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 AC068137.2-201ENST00000605408 478 ntBASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 AC092919.2-201ENST00000623631 1645 ntBASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC62Q6P9F0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 AL513480.1-201ENST00000451731 511 ntBASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC62Q6P9F0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 AC107918.2-201ENST00000530817 355 ntBASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 AL513210.1-201ENST00000629608 234 ntBASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 AL355312.1-201ENST00000407115 2176 ntBASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC62Q6P9F0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC62Q6P9F0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms