Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.86■□□□□ 0.13
TMEM53Q6P2H8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 CICP13-201ENST00000422015 2789 ntBASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 AC083849.1-201ENST00000615227 514 ntBASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 AC093010.1-201ENST00000473625 1624 ntBASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TMEM53Q6P2H8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 AL096828.2-201ENST00000567259 1965 ntBASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 VENTXP5-201ENST00000523979 775 ntBASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 AL121956.5-201ENST00000625261 221 ntBASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
TMEM53Q6P2H8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM53Q6P2H8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM53Q6P2H8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM53Q6P2H8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms