Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL589182.2-201ENST00000619332 1049 ntBASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 HLA-A-201ENST00000376802 1334 ntBASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 AC107918.4-202ENST00000641623 219 ntBASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 AC148477.5-201ENST00000625164 1645 ntBASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 NKILA-202ENST00000614771 2598 ntBASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TTC39BQ5VTQ0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
TTC39BQ5VTQ0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
TTC39BQ5VTQ0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 RNA5SP419-201ENST00000515908 135 ntBASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 AC148477.8-201ENST00000624298 468 ntBASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 NCF1C-201ENST00000438382 1427 ntBASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 AC124067.4-201ENST00000519691 2379 ntBASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TTC39BQ5VTQ0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TTC39BQ5VTQ0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms